Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015911925.1_cds_XP_016461901.1_55179
CDS Infomation

[gene=LOC107785176] [db_xref=GeneID:107785176] [protein=3-phosphoinositide-dependent protein kinase 2-like isoform X2] [protein_id=XP_016461901.1] [location=join(21114..21269,22134..22314,22453..22505,22875..22976,23049..23157,23274..23352,23613..23778,33334..33468,33626..33792,34474..34696,34811..34894)] [gbkey=CDS]
Sequence

ATGATGGAGCAAGAATTAAATTCAAAGCTTAGGATTCAGAACAATGCACCAAATGCTCAG
AGATCTAAGAGCTTCGCATTTAGAGCACCTCAGGTGAATTTCACAATCCAAGATTTTGAA
TTGGGAAAGATCTATGGAGTTGGTTCTTATTCCAAGGTTGTCAGAGCAAAAAAGAAAGAT
ACAGGGAATGTTTATGCCTTGAAGATCATGGACAAAAAGTTCATCACTAAAGAAAATAAG
ACTGCTTATGTGAAATTAGAGAGAATTGTGCTTGATCAACTGGATCATCCTGGCATTGTA
CGACTATTTTTCACCTTCCAAGACACTTTTTCACTATACATGGGCCTGGAGTCCTGCGAA
GGTGGGGAGCTTTTTGAACAAATTACCCGGAAAGGCCGTTTGTCTGAGGAGGAGGCACGT
TTTTATGCAGCTGAAGTAGCAGATGCTCTTGAATATATACACAGCATGGGATTGATTCAT
CGAGATATTAAGCCCGAGAACCTGCTACTTACTGCAGATGGACATATTAAAGTTGCCGAC
TTTGGCAGTGTAAAGCCCATGCAAGATAGCAGAATAACAGTCCTTCCAAATGCAGCATCA
GATGACAAGGCTTGTACTTTTGTGGGGACAGCTGCATATGTGCCTCCTGAAGTTTTAAAT
TCTTCTCCTGCAACTTTTGGAAATGATCTCTGGGCACTTGGCTGCACCTTGTATCAAATG
CTTTCAGGAACTTCTCCCTTTAAAGATGCCAGCGAATGGCTCATCTTTCAAAGAATCGTT
GCAAGAGATATCAGGTTCCCAAATCATTTTTCGGATGAAGCCAGAGATCTCATTGATAGG
TTGCTGGATATTGATCCTAGCCGAAGACCAGGTGCTGGACCTGATGGTTACGCTTCACTG
AAGAACCATCCTTTCTTTAGGGAGGTTGATTGGGATAGTTTAAGGTCTCAAACTCCTCCA
TGTCTTGCTGCAGAGCCAAAAGCCCACTCTACTCGTAGCAGTGGTGAAGATCACGATTCT
TCATTGAATCCATCACATATTGGGGATGGATCAGCTAGAACTAATGACGGAAATGGTGGT
GCAACATCCTCTTCTGAAGCTGGTAGCATTACCAGGCTTGCTTCAATTGACTCTTTTGAT
TCAAAATGGAAACAATTTTTGGAGCCTGGTGAATCCGTTCTTATGATCTCCATGGTGAAA
AAGATACAGAAGCTTACAAGCAAGAAAGTTCAGCTTATCCTGACAAATAAGCCAAAGTTG
ATCTATGTAGACCCCTCAAAGTTGGTGGTCAAAGGGAACATTATATGGTCCGACAATTCT
AACGATCTTAGTATTCAAGTCACAAGTCCTTCACAGTTTAAGGTTTGCACACCAAAGAAA
GTATTGTCTTTCGAGGATGCTAAGCAACGAGCAATGCAGTGGAAAAAAGCAATTGAAGCT
CTCCAAAACCGGTGA

Peptide Sequence

PEP ID

XP_016461901.1
PEP Infomation

PREDICTED: 3-phosphoinositide-dependent protein kinase 2-like isoform X2 [Nicotiana tabacum]
Sequence

MMEQELNSKLRIQNNAPNAQRSKSFAFRAPQVNFTIQDFELGKIYGVGSYSKVVRAKKKD
TGNVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGIVRLFFTFQDTFSLYMGLESCE
GGELFEQITRKGRLSEEEARFYAAEVADALEYIHSMGLIHRDIKPENLLLTADGHIKVAD
FGSVKPMQDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQM
LSGTSPFKDASEWLIFQRIVARDIRFPNHFSDEARDLIDRLLDIDPSRRPGAGPDGYASL
KNHPFFREVDWDSLRSQTPPCLAAEPKAHSTRSSGEDHDSSLNPSHIGDGSARTNDGNGG
ATSSSEAGSITRLASIDSFDSKWKQFLEPGESVLMISMVKKIQKLTSKKVQLILTNKPKL
IYVDPSKLVVKGNIIWSDNSNDLSIQVTSPSQFKVCTPKKVLSFEDAKQRAMQWKKAIEA
LQNR

Transcript Sequence

Gene sequence data has not been registered.